New Atlas: World-first database catalogs 1,000s of viruses in our gut microbiome. “Researchers from Ohio State University have created the first catalog of viral populations known to inhabit the human gut. Called the Gut Virome Database, the study suggests each person’s gut viral population is as unique as their fingerprints.”
EurekAlert: Microbiome search engine can increase efficiency in disease detection and diagnosis. “Big data makes big promises when it comes to providing insights into human behavior and health. The problem is how to harness the information it provides in an efficient manner. An international team of researchers has proposed a microbiome search-based method, via Microbiome Search Engine (MSE), to analyze the wealth of available health data to detect and diagnose human diseases.”
Chemistry World: Open access Atlas maps out microbial natural products. “A new open access database of microbial natural products has launched online. The Natural Products Atlas (NPAtlas) is free to use and contains more than 24,000 chemical structures. The tool is based on Fair data principles, making the information within it easier to search and use in secondary analysis.” I don’t put anything in RB unless I can get a basic understanding of what the resource is about. (I have skipped including items because I just didn’t get the underlying discipline or presentation.) In this case I had no idea what microbial natural products are, but I now understand better thanks to PubMed.
PR Newswire: Million Microbiome of Humans Project (MMHP) is launched, aiming to build the world’s largest human microbiome database (PRESS RELEASE). ” The ‘Million Microbiome of Humans Project’ (MMHP) was officially launched at the 14th International Conference on Genomics (ICG-14). Scientists from China, Sweden, Denmark, France, Latvia and other countries will cooperate in microbial metagenomic research, aiming to sequence and analyze one million microbial samples from intestines, mouth, skin, reproductive tract and other organs in the next three to five years to draw a microbiome map of the human body and build the world’s largest database of human microbiome.”
Phys .org: Powerful online tool will help researchers make new genomic discoveries. “By integrating data across thousands of microbial genomes, ‘AnnoTree’ provides a comprehensive framework for exploring the evolution of microbial genes and functions, and can be used to advance research across a wide range of industries including microbiology, biotechnology, industrial products, biofuels, and food science.”
Dentistry Today: More Than 80 Species Added to Oral Microbiome Database. “The list of bugs in your mouth keeps growing, as the Forsyth Institute has added more than 80 species to its online expanded Human Oral Microbiome Database (eHOMD). It now indexes 772 microbial species present in the aerodigestive tract (ADT), which includes the mouth, throat, nose, sinuses, and esophagus.? Eww. Pardon me, I need to go chug some Listerine.
Phys.org: New gene catalog of ocean microbiome reveals surprises . “Microbes dominate the planet, especially the ocean, and help support the entire marine food web. In a recent report published in Nature Microbiology, University of Hawai’i at Mānoa (UHM) oceanography professor Ed DeLong and his team report the largest single-site microbiome gene catalog constructed to date.”